7/28/23: Discuss the modeling issue wrt the women in space data analysis

 

Welcome to: The human race into space will require kidneys

Agenda and Minutes

Biosphere II contains the world's biggest indoor ocean:

 

 

 

 

1. Announcements

• We will continue to meet weekly.
  

2. Updates/status reports

• Women in space analysis.

The meeting ended here.

3. Reading and discussion

• Readings: kidneys or space, depending on interest and attendance.
  
• Kidneys: we read up to the last paragraph in Section 5, and can start there next time. We also may want to review the appendices (we can evaluate whether to do that). Source: https://www.mdpi.com/2077-0383/9/2/572.
• Space: evaluate what to read next!
• We could do another documentation related to the astronauts analysis. One would be https://planet4589.org/space/astro/web/missions.html, describing https://planet4589.org/space/astro/lists/missions.html.
  
• We once started: https://www.newthingsunderthesun.com/pub/4xnyepnn/release/9. We read up to "In their paper, firms use these technologies to produce a fixed amount of output every period."
• https://towardsdatascience.com/understanding-auc-roc-curve-68b2303cc9c5 might be good to read at some point. We could evaluate that.
• Attendees could suggest possible readings/viewings between now and next time, or we could take time now for each person to search for things and report back.
  

• Kidney articles we could evaluate later as needed:
  
• Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study, 
• Jesper Kers*, Roman D Bülow*, Barbara M Klinkhammer, Gerben E Breimer, Francesco Fontana, Adeyemi Adefidipe Abiola, Rianne Hofstraat, Garry L Corthals, Hessel Peters-Sengers, Sonja Djudjaj, Saskia von Stillfried, David L Hölscher, Tobias T Pieters, Arjan D van Zuilen, Frederike J Bemelman, Azam S Nurmohamed, Maarten Naesens, Joris J T H Roelofs, Sandrine Florquin, Jürgen Floege, Tri Q Nguyen, Jakob N Kather†, Peter Boor†, C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\PIIS2589750021002119.pdf 
• The Ensembles of Machine Learning Methods for Survival Predicting after Kidney Transplantation Yaroslav Tolstyak 1,2, Rostyslav Zhuk 3, Igor Yakovlev 2, Nataliya Shakhovska 4, Michal Gregus ml 5, Valentyna Chopyak 1 and Nataliia Melnykova 4, C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\applsci-11-10380.pdf.
• Artificial intelligence and kidney transplantation, Nurhan Seyahi, Seyda Gul Ozcan, C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\WJT-11-277.pdf

• Here are some generic questions about articles (and videos):
• What is the source?
• What is the most significant advance in the human knowledge presented in the paper?
• Why is that advance important?
• What important questions arise from the paper for future research?
• What important questions would it be nice if the paper answered, but does not answer?
• What does the paper present that is novel (no one else has provided that before)?
• What is the relevance of the paper to our satellite research goals?
• Questions from the group?

 4. Completed readings include numerous prior items as well as these:

• 7/21/2023: We read https://planet4589.org/space/gcat/web/intro/type.html.
• 5/12/2023: We read https://planet4589.org/space/astro/web/astrolist.html and looked at https://planet4589.org/space/astro/lists/astro.html for examples. It appears that the date of the first flight for each astronaut is NOT given, even though the rows are in chronological order!
• 3/17/23: We read https://planet4589.org/space/astro/web/astrolist.html.
• We finished section 6 of MR paper (C:\Users\jdberleant\Dropbox\research\SpaceTravelMetric-b6-5-16\PapersAndPresentations\byOthers\MatthewRoughanDraft.pdf). This completes the parts that we planned to read. 
• Video: https://www.youtube.com/watch?v=S9o66fH_sgo (about MOXIE device which converts CO2 to oxygen). We then read a bit more about MOXIE on wikipedia.
• Https://www.theatlantic.com/science/archive/2019/07/we-need-new-science-progress/594946 on "progress studies." Completed 9/30/22.
• Ryan et al., "A Forgotten Moment in Physiology: the Lovelace Woman in Space Program (1960-1962)", 2009. Completed 7/22/22.
• Various previous papers.
  

7/21/23: Finished a Planet4589 documentation file

Welcome to: The human race into space will require kidneys

Agenda and Minutes

Two of the more farcical sights in Roswell, NM (summer 2022)

 

Add one of these unique aliens to your figurine collection!

Better keep a watchful eye on the kids...

1. Announcements

• We will continue to meet weekly.
  

2. Updates/status reports

• PT. Continuing experiments. Working on the training vs. validation set ratio.
  
• AM. The supremum of .23 seems to be the best value at keeping the SSR low so i kept that value. But the midpoint I have now is 1995 and shallowness is 10.71. I am still playing around with numbers but this is what I have found so far. (Cf. https://ojs.library.okstate.edu/osu/index.php/OAS/article/view/9449).
  
• EG has a draft of a paper on cancer IT/ensemble simulations and would like some comments. We could distribute it to the group and consider it for OAS or AAS... Maybe a focus on kidneys is possible? However it is tentatively planned for him to present it for comments and suggestions in the ML study group at 4:00 in a couple of weeks.
• New moon launch: Chandrayaan-3. We watched a video.
  

3. Reading and discussion

• Readings:
• For the "SatType scheme" page:
• We finished documentation file https://planet4589.org/space/gcat/web/intro/type.html! (It was at https://www.planet4589.org  >  https://planet4589.org/space/index.html  >  https://planet4589.org/space/gcat/web/intro > https://planet4589.org/space/gcat/web/intro/type.html.) 
• Next time we could read about kidneys, or evaluate/vote on abstracts for a next article to read about space.
  

Meeting ended here.

• We could also do another documentation related to the astronauts analysis. Most germane would be https://planet4589.org/space/astro/web/missions.html.
  

• Kidneys: we read up to the last paragraph in Section 5, and can start there next time. We also may want to review the appendices (we can evaluate whether to do that). Source: https://www.mdpi.com/2077-0383/9/2/572.
• We earlier started: https://www.newthingsunderthesun.com/pub/4xnyepnn/release/9. We read up to "In their paper, firms use these technologies to produce a fixed amount of output every period." MC later requested putting our comments in the minutes for later review - good idea. Maybe we can time share across 2 readings next time, and thus get to some material from this source.
• https://towardsdatascience.com/understanding-auc-roc-curve-68b2303cc9c5 might be good to read at some point. We should evaluate that.
• We can evaluate:  
• Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study, 
• Jesper Kers*, Roman D Bülow*, Barbara M Klinkhammer, Gerben E Breimer, Francesco Fontana, Adeyemi Adefidipe Abiola, Rianne Hofstraat, Garry L Corthals, Hessel Peters-Sengers, Sonja Djudjaj, Saskia von Stillfried, David L Hölscher, Tobias T Pieters, Arjan D van Zuilen, Frederike J Bemelman, Azam S Nurmohamed, Maarten Naesens, Joris J T H Roelofs, Sandrine Florquin, Jürgen Floege, Tri Q Nguyen, Jakob N Kather†, Peter Boor†, 
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\PIIS2589750021002119.pdf 
• The Ensembles of Machine Learning Methods for Survival Predicting after Kidney Transplantation Yaroslav Tolstyak 1,2, Rostyslav Zhuk 3, Igor Yakovlev 2, Nataliya Shakhovska 4,
• Michal Gregus ml 5, Valentyna Chopyak 1 and Nataliia Melnykova 4, 
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\applsci-11-10380.pdf.
• We can evaluate:
• Artificial intelligence and kidney transplantation, 
• Nurhan Seyahi, Seyda Gul Ozcan,  
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\WJT-11-277.pdf

• Here are some generic questions about articles (and videos):
• What is the source?
• What is the most significant advance in the human knowledge presented in the paper?
• Why is that advance important?
• What important questions arise from the paper for future research?
• What important questions would it be nice if the paper answered, but does not answer?
• What does the paper present that is novel (no one else has provided that before)?
• What is the relevance of the paper to our satellite research goals?
• Questions from the group?

 4. Completed readings include numerous prior items as well as these:

• 7/21/2023: We read https://planet4589.org/space/gcat/web/intro/type.html.
• 5/12/2023: We read https://planet4589.org/space/astro/web/astrolist.html and looked at https://planet4589.org/space/astro/lists/astro.html for examples. It appears that the date of the first flight for each astronaut is NOT given, even though the rows are in chronological order!
• 3/17/23: We read https://planet4589.org/space/astro/web/astrolist.html.
• We finished section 6 of MR paper (C:\Users\jdberleant\Dropbox\research\SpaceTravelMetric-b6-5-16\PapersAndPresentations\byOthers\MatthewRoughanDraft.pdf). This completes the parts that we planned to read. 
• Video: https://www.youtube.com/watch?v=S9o66fH_sgo (about MOXIE device which converts CO2 to oxygen). We then read a bit more about MOXIE on wikipedia.
• Https://www.theatlantic.com/science/archive/2019/07/we-need-new-science-progress/594946 on "progress studies." Completed 9/30/22.
• Ryan et al., "A Forgotten Moment in Physiology: the Lovelace Woman in Space Program (1960-1962)", 2009. Completed 7/22/22.
• Various previous papers.
  

7/14/23: Feasibility of a new paper? Etc.

Welcome to: The human race into space will require kidneys

Agenda and Minutes

Lava River Cave, Flagstaff, AZ, Summer 2022:

Lump of porous rock solidified from lava

 

Floor of cave with rocks partially submerged in frozen lava.

Some viscous lava was pushed upward by a falling rock and then solidified?

1. Announcements

• We will continue to meet weekly.
  

2. Updates/status reports

• PT. Working on continued model training.
• AM.
  
• Congratulations to VJB!
  
• A paper may be possible for OAS. RS and HA will discuss offline the feasibility of this and, if they determine a path forward, report back with a suggestion.
  
• EG has a draft of a paper on cancer IT/ensemble simulations and would like some comments. We could distribute it to the group and consider it for OAS or AAS... Maybe a focus on kidneys is possible? However it is tentatively planned for him to present it for comments and suggestions in the ML study group at 4:00 in a couple of weeks.
• New moon launch
  

3. Reading and discussion

• Presentation (RS) 

• Readings:
• For the "SatType scheme" page:
• ... at https://www.planet4589.org  >  https://planet4589.org/space/index.html  >  https://planet4589.org/space/gcat/web/intro > https://planet4589.org/space/gcat/web/intro/type.html. We got up to the "Byte 7" section, and can start there next time.
• We could also do another documentation related to the astronauts analysis. Most germane would be https://planet4589.org/space/astro/web/missions.html.
  

• Kidneys: we read up to the last paragraph in Section 5, and can start there next time. We also may want to review the appendices (we can evaluate whether to do that). Source: https://www.mdpi.com/2077-0383/9/2/572.
• We earlier started: https://www.newthingsunderthesun.com/pub/4xnyepnn/release/9. We read up to "In their paper, firms use these technologies to produce a fixed amount of output every period." MC later requested putting our comments in the minutes for later review - good idea. Maybe we can time share across 2 readings next time, and thus get to some material from this source.
• https://towardsdatascience.com/understanding-auc-roc-curve-68b2303cc9c5 might be good to read at some point. We should evaluate that.
• We can evaluate:  
• Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study, 
• Jesper Kers*, Roman D Bülow*, Barbara M Klinkhammer, Gerben E Breimer, Francesco Fontana, Adeyemi Adefidipe Abiola, Rianne Hofstraat, Garry L Corthals, Hessel Peters-Sengers, Sonja Djudjaj, Saskia von Stillfried, David L Hölscher, Tobias T Pieters, Arjan D van Zuilen, Frederike J Bemelman, Azam S Nurmohamed, Maarten Naesens, Joris J T H Roelofs, Sandrine Florquin, Jürgen Floege, Tri Q Nguyen, Jakob N Kather†, Peter Boor†, 
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\PIIS2589750021002119.pdf 
• The Ensembles of Machine Learning Methods for Survival Predicting after Kidney Transplantation Yaroslav Tolstyak 1,2, Rostyslav Zhuk 3, Igor Yakovlev 2, Nataliya Shakhovska 4,
• Michal Gregus ml 5, Valentyna Chopyak 1 and Nataliia Melnykova 4, 
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\applsci-11-10380.pdf.
• We can evaluate:
• Artificial intelligence and kidney transplantation, 
• Nurhan Seyahi, Seyda Gul Ozcan,  
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\WJT-11-277.pdf

• Here are some generic questions about articles (and videos):
• What is the source?
• What is the most significant advance in the human knowledge presented in the paper?
• Why is that advance important?
• What important questions arise from the paper for future research?
• What important questions would it be nice if the paper answered, but does not answer?
• What does the paper present that is novel (no one else has provided that before)?
• What is the relevance of the paper to our satellite research goals?
• Questions from the group?

 4. Completed readings include numerous prior items as well as these:

• 5/12/2023: We read https://planet4589.org/space/astro/web/astrolist.html and looked at https://planet4589.org/space/astro/lists/astro.html for examples. It appears that the date of the first flight for each astronaut is NOT given, even though the rows are in chronological order!
• 3/17/23: We read https://planet4589.org/space/astro/web/astrolist.html.
• We finished section 6 of MR paper (C:\Users\jdberleant\Dropbox\research\SpaceTravelMetric-b6-5-16\PapersAndPresentations\byOthers\MatthewRoughanDraft.pdf). This completes the parts that we planned to read. 
• Video: https://www.youtube.com/watch?v=S9o66fH_sgo (about MOXIE device which converts CO2 to oxygen). We then read a bit more about MOXIE on wikipedia.
• Https://www.theatlantic.com/science/archive/2019/07/we-need-new-science-progress/594946 on "progress studies." Completed 9/30/22.
• Ryan et al., "A Forgotten Moment in Physiology: the Lovelace Woman in Space Program (1960-1962)", 2009. Completed 7/22/22.
• Various previous papers.
  

 

7/7/23: Presentation (RS), etc.

Welcome to: The human race into space will require kidneys

Agenda and Minutes

 

Workroom "from" Goddard's facility.

 

Rocket in flight.

Presented to the people of New Mexico

Some things in the Roswell Museum & Arts Center (Summer 2022)

 

1. Announcements

• We will continue to meet weekly.
  

2. Updates/status reports

• PT
• AM
• A paper is possible for OAS. AAS is also a possibility. EG suggests seeing what the difference is between our answers and ChatGPT's answers. The effects of ChatGPT on education is a possible angle. We can discuss more next time. 
• OAS deadline is Aug. 15, and the meeting is very close to OK City. The meeting has an engineering section that might be appropriate.
• HA plans to suggest an outline for our next meeting.
  
• EG has a draft of a paper on cancer IT/ensemble simulations and would like some comments. We could distribute it to the group and consider it for OAS or AAS... Maybe a focus on kidneys is possible? However it is tentatively planned for him to present it for comments and suggestions in the ML study group at 4:00 in a couple of weeks.

3. Reading and discussion

• Presentation (RS) 

(The meeting ended here)

• Readings:
• For the "SatType scheme" page:
• ... at https://www.planet4589.org  >  https://planet4589.org/space/index.html  >  https://planet4589.org/space/gcat/web/intro > https://planet4589.org/space/gcat/web/intro/type.html. We got up to the "Byte 7" section, and can start there next time.
• We could also do another documentation related to the astronauts analysis. Most germane would be https://planet4589.org/space/astro/web/missions.html.
  

• Kidneys: we read up to Section 4, "Future Directions" and can start there next time, from https://www.mdpi.com/2077-0383/9/2/572.
• We earlier started: https://www.newthingsunderthesun.com/pub/4xnyepnn/release/9. We read up to "In their paper, firms use these technologies to produce a fixed amount of output every period." MC later requested putting our comments in the minutes for later review - good idea. Maybe we can time share across 2 readings next time, and thus get to some material from this source.
• https://towardsdatascience.com/understanding-auc-roc-curve-68b2303cc9c5 might be good to read at some point. We should evaluate that.
• We can evaluate:  
• Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study, 
• Jesper Kers*, Roman D Bülow*, Barbara M Klinkhammer, Gerben E Breimer, Francesco Fontana, Adeyemi Adefidipe Abiola, Rianne Hofstraat, Garry L Corthals, Hessel Peters-Sengers, Sonja Djudjaj, Saskia von Stillfried, David L Hölscher, Tobias T Pieters, Arjan D van Zuilen, Frederike J Bemelman, Azam S Nurmohamed, Maarten Naesens, Joris J T H Roelofs, Sandrine Florquin, Jürgen Floege, Tri Q Nguyen, Jakob N Kather†, Peter Boor†, 
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\PIIS2589750021002119.pdf
  

• We can evaluate: 

  • The Ensembles of Machine Learning Methods for Survival Predicting after Kidney Transplantation Yaroslav Tolstyak 1,2, Rostyslav Zhuk 3, Igor Yakovlev 2, Nataliya Shakhovska 4,
  • Michal Gregus ml 5, Valentyna Chopyak 1 and Nataliia Melnykova 4, 
  • C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\applsci-11-10380.pdf.
• We can evaluate:  
• Artificial intelligence and kidney transplantation, 
• Nurhan Seyahi, Seyda Gul Ozcan,  
• C:\Users\jdberleant\Dropbox\research\healthInformatics\JeongHoonShin\papersToSuggestForNoonResearchGroup\WJT-11-277.pdf

• Here are some generic questions about articles (and videos):
• What is the source?
• What is the most significant advance in the human knowledge presented in the paper?
• Why is that advance important?
• What important questions arise from the paper for future research?
• What important questions would it be nice if the paper answered, but does not answer?
• What does the paper present that is novel (no one else has provided that before)?
• What is the relevance of the paper to our satellite research goals?
• Questions from the group?

 4. Completed readings include numerous prior items as well as these:

• 5/12/2023: We read https://planet4589.org/space/astro/web/astrolist.html and looked at https://planet4589.org/space/astro/lists/astro.html for examples. It appears that the date of the first flight for each astronaut is NOT given, even though the rows are in chronological order!
• 3/17/23: We read https://planet4589.org/space/astro/web/astrolist.html.
• We finished section 6 of MR paper (C:\Users\jdberleant\Dropbox\research\SpaceTravelMetric-b6-5-16\PapersAndPresentations\byOthers\MatthewRoughanDraft.pdf). This completes the parts that we planned to read. 
• Video: https://www.youtube.com/watch?v=S9o66fH_sgo (about MOXIE device which converts CO2 to oxygen). We then read a bit more about MOXIE on wikipedia.
• Https://www.theatlantic.com/science/archive/2019/07/we-need-new-science-progress/594946 on "progress studies." Completed 9/30/22.
• Ryan et al., "A Forgotten Moment in Physiology: the Lovelace Woman in Space Program (1960-1962)", 2009. Completed 7/22/22.
• Various previous papers.