Agenda and Minutes
"The mangrove mesocosm of Biosphere 2" (+ finger):
1. Updates/announcements/status reports
- TC on the reductio ad absurdum argument for why f (endDate) cannot be exponential.
- JS review of https://www.nature.com/articles/s41598-022-12316-z
- Let's read & discuss abstract together first.
- Then JS will address key questions about it.
- NMIMS project: Qs and updates.
2. Reading and discussion
- Readings: kidneys or space (or both), depending on interest and attendance.
- Our own article “Future Satellite lifetime prediction from the historical trend in satellite half-lives,” Journal of Systemics, Cybernetics and Informatics (2022), 20(3):40-45. We got up to the paragraph beginning "Figure 4 shows the half-life 5 year moving average curve." and can start there.
- Current kidney reading: The Ensembles of Machine Learning Methods for Survival Predicting after Kidney Transplantation, Tolstyak et al., 2021, https://www.mdpi.com/2076-3417/11/21/10380. We previously got up to "The main objectives of this study are to use the Kapplan-Meier method and machine learning" and can start with that next time we do this article.
- Space readings. Here are some possible readings in order from highest to lowest score.
- 9/29/23: We checked https://www.linkedin.com/pulse/confusion-matrix-accuracy-precision-recall-f1-score-measures-silwal/ and evaluated it at 4 5/6.
- 9/29/23: We checked https://towardsdatascience.com/understanding-confusion-matrix-a9ad42dcfd62 and evaluated it at 4.5.
- 9/29/23: We checked https://towardsdatascience.com/understanding-auc-roc-curve-68b2303cc9c5, evaluating it at 4 1/3.
- 9/8/23: We could do part of: "Understanding Statistics and Experimental Design," https://link.springer.com/book/10.1007/978-3-030-03499-3. Chapter "Meta-Analysis" was evaluated at 4.
- 9/8/23: We once started: https://www.newthingsunderthesun.com/pub/4xnyepnn/release/9. We read up to "In their paper, firms use these technologies to produce a fixed amount of output every period." Working through more was evaluated at 4.
- 9/8/23: We could do this from the "talks" section of planet4589: https://planet4589.org/talks. The ones we looked at were all voted at 3 1/3.
- Attendees could suggest possible readings/viewings between now and next time, or we could take time now for each person to search for things and report back.
- Kidney articles evaluated for future reading.
- Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study, Jesper Kers*, Roman D Bülow*, Barbara M Klinkhammer, Gerben E Breimer, Francesco Fontana, Adeyemi Adefidipe Abiola, Rianne Hofstraat, Garry L Corthals, Hessel Peters-Sengers, Sonja Djudjaj, Saskia von Stillfried, David L Hölscher, Tobias T Pieters, Arjan D van Zuilen, Frederike J Bemelman, Azam S Nurmohamed, Maarten Naesens, Joris J T H Roelofs, Sandrine Florquin, Jürgen Floege, Tri Q Nguyen, Jakob N Kather†, Peter Boor†, https://pubmed.ncbi.nlm.nih.gov/34794930/. 9/1/23 vote was 3 5/6.
- Artificial intelligence and kidney transplantation, Nurhan Seyahi, Seyda Gul Ozcan, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8290997. 9/15/23 vote was 4.0.
- Here are some generic questions about articles (and videos):
- What is the source?
- What is the most significant advance in the human knowledge presented in the paper?
- Why is that advance important?
- What important questions arise from the paper for future research?
- What important questions would it be nice if the paper answered, but does not answer?
- What does the paper present that is novel (no one else has provided that before)?
- What is the relevance of the paper to our satellite research goals?
- Questions from the group?
3. Completed readings include numerous prior items as well as these:
- Kidneys:
- Covadonga Díez-Sanmartín and Antonio Sarasa Cabezuelo, Application of Artificial Intelligence Techniques to Predict Survival in Kidney Transplantation: A Review, https://www.mdpi.com/2077-0383/9/2/572. (Except appendices)
- Space:
- 7/21/2023: We finished https://planet4589.org/space/gcat/web/intro/type.html.
- 5/12/2023: We finished https://planet4589.org/space/astro/web/astrolist.html and looked at https://planet4589.org/space/astro/lists/astro.html for examples. It appears that the date of the first flight for each astronaut is NOT given, even though the rows are in chronological order!
- 3/17/23: We finished https://planet4589.org/space/astro/web/astrolist.html.
- We finished section 6 of MR paper (C:\Users\jdberleant\Dropbox\research\SpaceTravelMetric-b6-5-16\PapersAndPresentations\byOthers\MatthewRoughanDraft.pdf). This completes the parts that we planned to read.
- Video: https://www.youtube.com/watch?v=S9o66fH_sgo (about MOXIE device which converts CO2 to oxygen). We then read a bit more about MOXIE on wikipedia.
- Https://www.theatlantic.com/science/archive/2019/07/we-need-new-science-progress/594946 on "progress studies." Completed 9/30/22.
- Ryan et al., "A Forgotten Moment in Physiology: the Lovelace Woman in Space Program (1960-1962)", 2009. Completed 7/22/22.
- Various previous papers.
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